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BCSCDB: Biomarkers of Cancer Stem Cells Database

Number of entries related to SW1116 cell line is 118

GENE HGNC_ID MARKER_TYPE CANCER_TYPE HISTOLOGICAL_TYPE CELL_LINE CSC_ENRICHMENT METHOD EXPRESSION_LEVEL CONFIDENCE_SCORING GLOBAL_SCORING PUBMED_ID
DPP43009LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs and Western Blotting followed by IF staining and SFANA0.640.008531285270
EPCAM11529LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs and Western Blotting followed by IF staining and SFANA0.640.21131285270
LGR54504LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs and Western Blotting followed by IF staining and SFANA0.640.075331285270
CAPZA11488HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Proteomics and Western BlottingUp0.360.001121455326
CLIC12062HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Proteomics and Western BlottingUp0.360.004221455326
EEF1D3211HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Proteomics and Western BlottingUp0.360.004221455326
GAPDH4141HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Proteomics and Western BlottingUp0.360.005321455326
SFN10773HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Proteomics and Western BlottingUp0.360.005321455326
TUBB20778HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Proteomics and Western BlottingUp0.360.003221455326
UFD112520HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Proteomics and Western BlottingUp0.360.001121455326
CD441681LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs followed by IF staining and SFANA0.36131285270
CD441681LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs followed by RT-PCR and SFANA0.36123674142
CD441681LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACsNA0.36132617772
CD441681LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs followed by SFANA0.36123007737
CD441681LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs followed by SFANA0.36123007737
ITGB16153LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by FACs and RT-PCRNA0.320.01821455326
PROM19454LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs followed by RT-PCR and SFANA0.320.758223674142
PROM19454LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by FACs and RT-PCRNA0.320.758221455326
PROM19454LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACsNA0.320.758232617772
PROM19454LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs followed by SFANA0.320.758223007737
PROM19454LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs followed by SFANA0.320.758223007737
PROM19454LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs followed by SFANA0.320.758231285270
CCND11582LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAWestern BlottingNA0.280.020123674142
E2F33115LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAWestern BlottingNA0.280.001123674142
MIR194-131564HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.240.002123007737
MIR29B131619HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.240.006423007737
MIR123133921HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Transcriptomics and qRT-PCRDown0.240.001122180714
MIR19231562HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Transcriptomics and qPCRUp0.240.002122180714
MIR194-131564HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Transcriptomics and qPCRUp0.240.002122180714
MIR21531592HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Transcriptomics and qPCRUp0.240.002122180714
MIR29B131619HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Transcriptomics and qPCRUp0.240.006422180714
MIR3231631HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Transcriptomics and qPCRUp0.240.004222180714
MIR33A31634HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Transcriptomics and qPCRUp0.240.002122180714
MIR9331645HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by Transcriptomics and qRT-PCRDown0.240.003222180714
MIR302C31764HTM/LTMDukes Type A Colon CancerAdenocarcinomaSW1116NAFACs for CSC marker followed by qRT-PCRDown0.20.002132617772
ABCG274LTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by RT-PCRNA0.20.173921455326
BMI11066LTMDukes Type A Colon CancerAdenocarcinomaSW1116NART-PCR followed by SFANA0.20.113523674142
POU5F19221LTMDukes Type A Colon CancerAdenocarcinomaSW1116NART-PCR followed by SFANA0.20.644823674142
MIR101-131488HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003222180714
MIR120235268HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.002123007737
MIR122933924HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR123433926HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.004223007737
MIR126535332HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR1285-135277HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR128735280HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR138-231525HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001122180714
MIR1731547HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003222180714
MIR193A31563HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.004222180714
MIR19731569HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR1972-137060HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR197637064HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR19A31574HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.006422180714
MIR20A31577HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.004222180714
MIR21031587HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.006423007737
MIR211437308HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR211637310HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR22131601HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.005323007737
MIR22231602HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.002123007737
MIR23A31605HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001122180714
MIR29A31616HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.005323007737
MIR29C31621HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003222180714
MIR301A31622HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003222180714
MIR30e31629HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003222180714
MIR3131630HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.006422180714
MIR3131630HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.006423007737
MIR3135B41783HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR314538327HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR314938251HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR3150B38938HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR319738366HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR365A33692HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003223007737
MIR367938979HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR374A31788HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.002122180714
MIR42431881HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.006422180714
MIR425338231HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR425438193HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR425938309HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR432338394HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR442841667HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003223007737
MIR444841604HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR445141858HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR448741851HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003223007737
MIR449B32794HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.003223007737
MIR452141813HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003223007737
MIR4524A41771HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR465141647HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR468841897HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.002123007737
MIR470141627HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR472241782HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR472541608HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR472841632HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR474141661HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.002123007737
MIR476341677HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR476941694HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR478441580HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR486-132342HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.005323007737
MIR487B32533HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003222180714
MIR49332082HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001122180714
MIR49732088HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.005322180714
MIR519A132128HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001122180714
MIR52232127HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001122180714
MIR52432110HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001122180714
MIR54232534HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001122180714
MIR56132817HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001122180714
MIR57432830HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.003223007737
MIR58232838HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.006422180714
MIR58432840HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.002122180714
MIR59032846HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.002122180714
MIR7-131638HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.004223007737
MIR76633139HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.002123007737
MIR87433643HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.002122180714
MIR87633653HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001122180714
MIR87733660HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001123007737
MIR87733660HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR88533659HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.001123007737
MIR9631648HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsUp0.040.003222180714
VTRNA2-137054HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001122180714
VTRNA2-137054HTMDukes Type A Colon CancerAdenocarcinomaSW1116NASFA followed by TranscriptomicsDown0.040.001122180714