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BCSCdb: Biomarkers of Cancer Stem Cells Database

BCSCDB allows the user to browse through the database in the following ways:

  1. Browse by Biomarkers
  2. Browse by Clinical Biomarkers
  3. Browse the Clinical Trial Drugs against CSC Biomarkers
  4. Browse by Cell lines
  5. Browse by Therapeutic targets
  6. Browse by Interactions


Browse the cancer stem cell biomarker genes in alphabetical order


Browse the clinical biomarkers for each cancer type


Browse the cell line specific biomarkers for each cancer type



Browse the therapeutic targets in alphabetical order


Browse the interaction networks specific to cell lines

The interaction legends

Node Attributes: Node color denotes the expression level of the target biomarker/gene for example

Red color of node signify upregulated expression of target gene
Green color of node signify downregulated expression of target gene
Grey color of node signify data not available of target gene

Edge Attributes: Edge colour denotes the type of interaction between the nodes
Edge Shape denotes the expression level of the target gene or node

Green edge colour signifies miRNA-mRNA interaction Arrow shape indicates upregulated expression of target gene
Blue edge colour signifies Protein-Gene interaction T-shape indicates downregulated expression of target gene
Pink edge colour signifies Protein-Protein interaction Straight line indicates unchanged expression of target gene
Red edge colour signifies RNA-Protein interaction
CancerCell LineNetworkData
Lung
A549NetworkData
H1299NetworkData
H1975NetworkData
SPCA1NetworkData
Breast
MCF7NetworkData
MDA-MB-231NetworkData
MDA-MB-468NetworkData
SUM159NetworkData
T47DNetworkData
Pancreatic
PANC-1NetworkData
SW1990NetworkData
ColonHT-29NetworkData
Gastric
BGC-823NetworkData
MKN45NetworkData
SGC-7901NetworkData
HepaticHuh7NetworkData