BCSCdb

Number of interactions with HT-29 is 38

INTERACTOR1	INT1_HGNC_ID	INTERACTOR2	INT2_HGNC_ID	INTERACTION_TYPE	CSC_METHOD	CANCER_TYPE	HISTOLOGICAL_TYPE	CELL_LINE	INTERACTION_METHOD	EXPRESSION_LEVEL	PUBMED_ID
OGT	8127	CBX4	1554	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	AGO2	3263	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	EMX1	3340	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	IDI1	5387	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
YAP1	16262	KLF5	6349	Protein-Protein Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	Co-IP assay	NA	29312609
OGT	8127	KPNA2	6395	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	LMNB1	6637	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	MYBL1	7547	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	RANGAP1	9854	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	RAP2B	9862	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	ST3GAL1	10862	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	ZNHIT3	12309	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	ZMYM2	12989	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	ARHGAP9	14130	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	MRPL13	14278	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	STRN4	15721	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	ZNF337	15809	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	TRIB1	16891	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	RXFP2	17318	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	SHKBP1	19214	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	USP42	20068	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	MYPOP	20178	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	RBM28	21863	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	COL22A1	22989	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	TMC4	22998	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	GTPBP10	25106	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	ARHGAP24	25361	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	CPLANE2	28127	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	NTPCR	28204	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	RRP8	29030	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	ZNF784	33111	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
OGT	8127	MICOS13	33702	Protein-Gene Interaction	SFA	Colon Cancer	Adenocarcinoma	HT-29	ChIP-seq followed by qPCR	NA	28096468
PRDX2	9353	CD44	1681	Gene-Gene Interaction	NA	Colon Cancer	Adenocarcinoma	HT-29	ShRNA mediated knockdown of PRDX2 followed by qRT-PCR	Down	27894099
B4GALNT3	24137	POU5F1	9221	Gene-Gene Interaction	NA	Colon Cancer	Adenocarcinoma	HT-29	SiRNA mediated knockdown of B4GALNT3 followed by RT-PCR	Down	25003232
PRDX2	9353	CD133	9454	Gene-Gene Interaction	NA	Colon Cancer	Adenocarcinoma	HT-29	ShRNA mediated knockdown of PRDX2 followed by qRT-PCR	Down	27894099
PRDX2	9353	EpCAM	11529	Gene-Gene Interaction	NA	Colon Cancer	Adenocarcinoma	HT-29	ShRNA mediated knockdown of PRDX2 followed by qRT-PCR	Down	27894099
PRDX2	9353	NANOG	20857	Gene-Gene Interaction	NA	Colon Cancer	Adenocarcinoma	HT-29	ShRNA mediated knockdown of PRDX2 followed by qRT-PCR	Down	27894099
B4GALNT3	24137	NANOG	20857	Gene-Gene Interaction	NA	Colon Cancer	Adenocarcinoma	HT-29	SiRNA mediated knockdown of B4GALNT3 followed by RT-PCR	Down	25003232