| Name of the Domain |
Number of interacting motif instances in LMPID |
| PDZ domain |
274 |
| SH3 domain |
153 |
| WW domain |
156 |
| AF-2 transcriptional activation domain |
111 |
| 14-3-3 domain |
100 |
| EH domain
|
84 |
| WD40 repeat domain |
52 |
| SH2 domain
|
50 |
| PTB domain
|
49 |
| EF hand |
37 |
| B domain |
34 |
| Hydrophobic cleft formed by subdomains 1 and 3 |
33 |
| WH1 domain |
33 |
| Ankyrin repeat domain |
32 |
| MATH domain |
29 |
| Calcineurin-like phosphoesterase domain |
26 |
| C-terminal appendage domain |
26 |
| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain |
26 |
| MLLE domain |
26 |
| Ligand-binding domain of nuclear hormone receptor |
24 |
| Homeodomain |
22 |
| PCNA, C-terminal domain |
21 |
| Conserved C-Terminal (CCT) domain |
20 |
| Protein kinase domain |
20 |
| Substrate-binding domain(SBD) of SINA/Siah proteins |
19 |
| Cyclin, N-terminal domain |
18 |
| UEV domain |
18 |
| PIF-binding pocket |
17 |
| Tetratricopeptide repeat (TPR) domain |
14 |
| MYND domain |
13 |
| BRCT domain |
12 |
| Clathrin propeller repeat |
12 |
| Galactose oxidase, central domain |
12 |
| Gamma adaptin ear (GAE) domain |
12 |
| GYF domain |
11 |
| TKB Domain |
11 |
| Alpha M I domain |
10 |
| BIR domain |
10 |
| FHA domain |
10 |
| Alpha-ear domain |
9 |
| Beta-trefoil domain |
9 |
| TRAF-like domain |
9 |
| Dynein light chain type 1 |
8 |
| Elastin-binding domain of EBP |
8 |
| RRM domain |
8 |
| V-domain |
8 |
| Chromo shadow domain |
7 |
| EBH domain |
7 |
| PAH2 domain |
7 |
| CaMK domain |
6 |
| EABR domain |
6 |
| N-terminal Integrin beta subunit |
6 |
| Catalytic domain of Ptprz |
5 |
| TFAT domain |
5 |
| HEAT repeat domain |
5 |
| MSP domain |
5 |
| SPRY domain |
5 |
| TRFH domain |
5 |
| VHL beta domain |
5 |
| WRKY domain |
5 |
| CB3 region |
4 |
| E1 domain |
4 |
| ND1 domain |
4 |
| ASH-RhoGAP-like domain |
3 |
| B-box portion of the Rb pocket domain |
3 |
| CAP-Gly domain |
3 |
| Sufu N-terminal binding domain |
3 |
| Leucine-rich repeats (LRR) |
3 |
| NOT1 superfamily homology domain |
3 |
| PUB domain |
3 |
| Rb pocket AB groove |
3 |
| UHM domain |
3 |
| Carboxyl-flanking region of the SPXX region |
2 |
| Catalytic domain of PKC-zeta |
2 |
| DGR domain |
2 |
| FERM domain |
2 |
| FG-GAP repeat |
2 |
| HORMA domain |
2 |
| RNP domain |
2 |
| Activator-binding Domain |
1 |
| ATP-binding pocket |
1 |
| Bcl-XL Delta-loop |
1 |
| C1 domain |
1 |
| Fibronectin-binding motif |
1 |
| Fn14 fragment of Fn |
1 |
| LysM domain |
1 |
| Plus3 domain |
1 |
| GTPase binding domain |
1 |
