Query   'UHM domain'  matched   3 Records

Record No : 1

Instance ID11035
Regular Expression[KR]{1,4}[KR]x[KR]Wx
Motif InstanceRKRRWS
Bait Uniprot AccessionP54253
Bait Uniprot IdentifierATX1_HUMAN
Bait Gene NameATXN1
Bait OrganismHomo sapiens (Human)
Sequence Position770-775
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)NMR; ITC; Competition binding
Interaction ID21035
Interacting DomainUHM domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)20037628
CommentsHuman Ataxin-1 (ATXN1), a member of the polyglutamine (polyQ) expanded protein family, interacts with and influences the function of the splicing factor U2AF65 (U2AF2) via its UHM ligand motif (ULM)

Record No : 2

Instance ID11036
Regular Expression[KR]{1,4}[KR]x[KR]Wx
Motif InstanceKRKSRWD
Bait Uniprot AccessionO75533
Bait Uniprot IdentifierSF3B1_HUMAN
Bait Gene NameSF3B1
Bait OrganismHomo sapiens (Human)
Sequence Position333-339
Critical ResiduesP6
Motif PTM(s)Unknown
Secondary StructureDisordered
Experimental Method(s)X-ray crystallography; NMR; Pull down; Mutation analysis; ITC
Interaction ID21036
Interacting DomainUHM domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)17589525, 16376933
CommentsHuman Splicing factor 45 (SPF45)/ RNA-binding motif protein 17 (RBM17) binds to the UHM-ligand motif (ULM) present in human Splicing factor 3B subunit 1 (SF3B1) for regulating the alternative splicing of apoptosis regulatory gene FAS

Record No : 3

Instance ID11037
Regular Expression[KR]{1,4}[KR]x[KR]Wx
Motif InstanceKKRKRSRWN
Bait Uniprot AccessionQ15637
Bait Uniprot IdentifierSF01_HUMAN
Bait Gene NameSF1
Bait OrganismHomo sapiens (Human)
Sequence Position15-23
Critical ResiduesP7; P8
Motif PTM(s)Unknown
Secondary StructureDisordered
Experimental Method(s)Mutation analysis; NMR
Interaction ID21037
Interacting DomainUHM domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)12718882
CommentsThe C-terminal RRM (RRM3) of human Splicing factor U2AF65/U2AF2 binds to the N-terminal UHM ligand motif (ULM) of human Splicing factor 1 (SF1)




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For queries, suggestions and submission of novel motifs please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in)