Total : 30 Records


Record No : 1

Instance ID10128
Regular ExpressionFxxF$
Motif InstanceFLVF
Bait Uniprot AccessionQ9LSF1
Bait Uniprot IdentifierOXI1_ARATH
Bait Gene NameOXI1
Sequence Position418-421
Critical ResiduesP1; P4
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H; Pull down; Co-IP; Mutation analysis
Interaction ID20128
Interacting DomainPIF-binding pocket
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)14749726
Comments"The C-terminal hydrophobic motif in Arabidopsis protein OXI1 (AGC2-1), which acts as a ""docking site"" for recruitment of Arabidopsis PDK1"

Record No : 2

Instance ID10294
Regular Expression[RK]xLx{0,1}[FYLIVMP]
Motif InstanceRKLAF
Bait Uniprot AccessionP38826
Bait Uniprot IdentifierORC6_YEAST
Bait Gene NameORC6
Sequence Position178-182
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H
Interaction ID20294
Interacting DomainCyclin, N-terminal domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)15105375
CommentsInteraction of the S-phase cyclin Clb5 with the RxL motif in the yeast initiator protein Orc6 provides an origin-localized replication control switch

Record No : 3

Instance ID10403
Regular Expressionx[FYH]x[IVM][^WFYP][^WFYP][ILM][ILMV]x
Motif InstanceGFTIDEIMS
Bait Uniprot AccessionP23803
Bait Uniprot IdentifierODD_DROME
Bait Gene Nameodd
Sequence Position383-391
Critical ResiduesP3
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H; Mutation analysis; Pull down
Interaction ID20403
Interacting DomainWD domain, G-beta repeat
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)16314497
CommentsThe eh1 motif in Drosophila Protein odd-skipped (odd) that binds to the WD40 domain of the Groucho corepressor

Record No : 4

Instance ID10463
Regular Expression[DE]HxY
Motif InstanceEHAY
Bait Uniprot AccessionP06492
Bait Uniprot IdentifierVP16_HHV11
Bait Gene NameORF_Name:UL48
Sequence Position361-364
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Mutation analysis
Interaction ID20463
Interacting DomainGalactose oxidase, central domain
Disease Association(s)Herpes simplex virus (HSV) infection
Inhibitor(s)Unknown
Reference(s)9389645
CommentsThe herpes simplex virus protein VP16 associates with the endogenous cell-proliferation factor HCF-1 through its HCF-1-binding motif (HBM)

Record No : 5

Instance ID10498
Regular Expressionxxx[SACLIVTM]xx[ILVMFCT]Qx{3,3}[RK]x{4,5}[RKQ]xx
Motif InstanceQCTLNSLQAMKRRLGSKTT
Bait Uniprot AccessionQ39575
Bait Uniprot IdentifierDYHG_CHLRE
Bait Gene NameODA2
Sequence Position869-887
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureAlpha helix
Experimental Method(s)Co-IP; In-vitro binding assay
Interaction ID20498
Interacting DomainEF hand
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)17634291
CommentsCa2+-dependent Interaction of the first EF hand of Chlamydomonas Flagellar outer dynein arm 18 kDa light chain LC4 with the IQ Motif region (869-887) of Dynein gamma chain

Record No : 6

Instance ID10507
Regular Expressionxxx[SACLIVTM]xx[ILVMFCT]Qx{3,3}[RK]x{4,5}[RKQ]xx
Motif InstanceSDNLTRLQVGFKRELIKEV
Bait Uniprot AccessionQ39575
Bait Uniprot IdentifierDYHG_CHLRE
Bait Gene NameODA2
Sequence Position1157-1175
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureAlpha helix
Experimental Method(s)Co-IP; In-vitro binding assay
Interaction ID20507
Interacting DomainEF hand
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)17634291
CommentsCa2+-dependent Interaction of the first EF hand of Chlamydomonas Flagellar outer dynein arm 18 kDa light chain LC4 with the IQ Motif region (1157-1175) of Dynein gamma chain

Record No : 7

Instance ID10733
Regular ExpressionxP[TS]APx
Motif InstanceRPSAPP
Bait Uniprot AccessionP69616
Bait Uniprot IdentifierORF3_HEVBU
Bait Gene NameORF_Name:ORF3
Sequence Position95-100
Critical ResiduesP3
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Western blot; Co-IP; Mutation analysis
Interaction ID20733
Interacting DomainUEV domain
Disease Association(s)Hepatitis E
Inhibitor(s)Unknown
Reference(s)21068219
CommentsThe UEV Domain binding P[TS]AP motif in Protein ORF3 of Hepatitis E virus genotype 1 that mediates binding to the UEV domain of human ESCRT-I complex subunit TSG101

Record No : 8

Instance ID10797
Regular Expression[LI]xCx[DE]
Motif InstanceLRCHE
Bait Uniprot AccessionO39521
Bait Uniprot IdentifierREPA_BEYDV
Bait Gene NameORF_Name:C1
Sequence Position181-185
Critical ResiduesP1; P3; P5
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H; Mutation analysis
Interaction ID20797
Interacting DomainB domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)10191192
CommentsThe Rb-binding LxCxE motif in the Bean yellow dwarf virus RepA protein that mediates binding to the maize retinoblastoma protein (ZmRBR1)

Record No : 9

Instance ID10798
Regular Expression[LI]xCx[DE]
Motif InstanceLLCNE
Bait Uniprot AccessionP14990
Bait Uniprot IdentifierREPA_MSVS
Bait Gene NameORF_Name:C1
Sequence Position198-202
Critical ResiduesP1; P5
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H; Mutation analysis
Interaction ID20798
Interacting DomainB domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)15722542
CommentsThe Rb-binding LxCxE motif in the Maize streak virus RepA protein that mediates binding to the maize retinoblastoma protein (ZmRBR1)

Record No : 10

Instance ID10800
Regular Expression[LI]xCx[DE]
Motif InstanceLICHE
Bait Uniprot AccessionP06847
Bait Uniprot IdentifierREPA_WDVS
Bait Gene NameORF_Name:C1
Sequence Position194-198
Critical ResiduesP3; P5
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H; Mutation analysis
Interaction ID20800
Interacting DomainB domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)7664747
CommentsThe Rb-binding LxCxE motif in the Wheat dwarf virus RepA protein that mediates binding to the Human Retinoblastoma-like protein 2 (RBL2) or p130RBR2

Record No : 11

Instance ID10902
Regular Expressionxxx[PV]xxP
Motif InstancePHVVDLP
Bait Uniprot AccessionP69616
Bait Uniprot IdentifierORF3_HEVBU
Bait Gene NameORF_Name:ORF3
Sequence Position102-108
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructurePPII helix
Experimental Method(s)Mutation analysis; Y2H; Pull down
Interaction ID20902
Interacting DomainSH3 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)11518702
CommentsThe ORF3 protein of Hepatitis E virus binds to the SH3 domain of human Adapter protein GRB2 through one of its PXXP motifs (102-108)

Record No : 12

Instance ID10903
Regular Expressionxxx[PV]xxP
Motif InstancePHVVDLP
Bait Uniprot AccessionP69616
Bait Uniprot IdentifierORF3_HEVBU
Bait Gene NameORF_Name:ORF3
Sequence Position102-108
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructurePPII helix
Experimental Method(s)Mutation analysis; Y2H; Pull down
Interaction ID20903
Interacting DomainSH3 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)11518702
CommentsThe ORF3 protein of Hepatitis E virus binds to the SH3 domain of human Proto-oncogene tyrosine-protein kinase SRC through one of its PXXP motifs (102-108)

Record No : 13

Instance ID10908
Regular Expressionxxx[PV]xxP
Motif InstanceVTRPSAP
Bait Uniprot AccessionP69616
Bait Uniprot IdentifierORF3_HEVBU
Bait Gene NameORF_Name:ORF3
Sequence Position93-99
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructurePPII helix
Experimental Method(s)Y2H; Pull down; Mutation analysis
Interaction ID20908
Interacting DomainSH3 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)11518702
CommentsThe ORF3 protein of Hepatitis E virus binds to the SH3 domain of human Adapter protein GRB2 through one of its PXXP motifs (93-99)

Record No : 14

Instance ID10909
Regular Expressionxxx[PV]xxP
Motif InstanceVTRPSAP
Bait Uniprot AccessionP69616
Bait Uniprot IdentifierORF3_HEVBU
Bait Gene NameORF_Name:ORF3
Sequence Position93-99
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructurePPII helix
Experimental Method(s)Y2H; Pull down; Mutation analysis
Interaction ID20909
Interacting DomainSH3 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)11518702
CommentsThe ORF3 protein of Hepatitis E virus binds to the SH3 domain of human Proto-oncogene tyrosine-protein kinase SRC through one of its PXXP motifs (93-99)

Record No : 15

Instance ID11054
Regular ExpressionPPxY
Motif InstancePPSY
Bait Uniprot AccessionP03276
Bait Uniprot IdentifierCAPSP_ADE02
Bait Gene NameORF_Name:L2
Sequence Position12-15
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Far Western blotting; Co-IP; SPR; Mutation analysis
Interaction ID21054
Interacting DomainWW domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)12450395
CommentsThe PY motif of the Penton base protein of Human adenovirus 2 that binds to the WW domain of human NEDD4-like E3 ubiquitin-protein ligase WWP1

Record No : 16

Instance ID11278
Regular Expression[KR]xTQTx
Motif InstanceKSTQTV
Bait Uniprot AccessionP09569
Bait Uniprot IdentifierPRO_ADE12
Bait Gene NameORF_Name:L3
Sequence Position109-114
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay
Interaction ID21278
Interacting DomainUnknown
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)12782328
CommentsThe LC8 dynein light chain binding motif in Human adenovirus A serotype 12 Endoprotease that binds to the rat 8 kDa Dynein light chain 1 (Dynll1)

Record No : 17

Instance ID11279
Regular Expression[KR]xTQTx
Motif InstanceKSTQTV
Bait Uniprot AccessionP11825
Bait Uniprot IdentifierPRO_ADE40
Bait Gene NameORF_Name:L3
Sequence Position109-114
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay
Interaction ID21279
Interacting DomainUnknown
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)12782328
CommentsThe LC8 dynein light chain binding motif in Human adenovirus F serotype 40 Endoprotease that binds to the rat 8 kDa Dynein light chain 1 (Dynll1)

Record No : 18

Instance ID11280
Regular Expression[KR]xTQTx
Motif InstanceKSTQTV
Bait Uniprot AccessionP11826
Bait Uniprot IdentifierPRO_ADE41
Bait Gene NameORF_Name:L3
Sequence Position109-114
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay
Interaction ID21280
Interacting DomainUnknown
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)12782328
CommentsThe LC8 dynein light chain binding motif in Human adenovirus F serotype 41 Endoprotease that binds to the rat 8 kDa Dynein light chain 1 (Dynll1)

Record No : 19

Instance ID11320
Regular Expression[DS]Kx[TVI]Q[TV][DE]
Motif InstanceAKSTQTF
Bait Uniprot AccessionP10193
Bait Uniprot IdentifierOBP_HHV11
Bait Gene NameORF_Name:UL9
Sequence Position745-751
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay
Interaction ID21320
Interacting DomainUnknown
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)21533121
CommentsThe LC8 dynein light chain binding motif in Replication origin-binding protein UL9 of Human herpes simplex virus 1 that interacts with the human 8 kDa Dynein light chain 1 (DYNLL1/DLC8)

Record No : 20

Instance ID11321
Regular Expression[DS]Kx[TVI]Q[TV][DE]
Motif InstanceAKSTQTF
Bait Uniprot AccessionP10193
Bait Uniprot IdentifierOBP_HHV11
Bait Gene NameORF_Name:UL9
Sequence Position745-751
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay
Interaction ID21321
Interacting DomainUnknown
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)21533121
CommentsThe LC8 dynein light chain binding motif in Replication origin-binding protein UL9 of Human herpes simplex virus 1 that interacts with the human 8 kDa Dynein light chain 2 (DYNLL2/DLC2)

Record No : 21

Instance ID11828
Regular ExpressionR[ST][ST]SL
Motif InstanceRSTSL
Bait Uniprot AccessionC8ZAV3
Bait Uniprot IdentifierC8ZAV3_YEAS8
Bait Gene NameORF_Name:EC1118_1I12
Sequence Position645-649
Critical ResiduesP1; P2; P4; P5
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay; Mutational analysis
Interaction ID21828
Interacting DomainSH3 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)18280496
CommentsThe consensus R[ST][ST]SL motif in Bnr1p of Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) that is necessary, but not sufficient for binding to the Fus1p SH3 domain

Record No : 22

Instance ID11829
Regular ExpressionR[ST][ST]SL
Motif InstanceRTSSL
Bait Uniprot AccessionC8Z519
Bait Uniprot IdentifierC8Z519_YEAS8
Bait Gene NameORF_Name:EC1118_1D0_
Sequence Position117-121
Critical ResiduesP1; P2; P4; P5
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay; Mutational analysis
Interaction ID21829
Interacting DomainSH3 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)18280496
CommentsThe consensus R[ST][ST]SL motif in Ste5p of Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) that is necessary, but not sufficient for binding to the Fus1p SH3 domain

Record No : 23

Instance ID11832
Regular ExpressionR[ST][ST]SL
Motif InstanceRSTSL
Bait Uniprot AccessionN1P0Y3
Bait Uniprot IdentifierN1P0Y3_YEASC
Bait Gene NameORF_Name:CENPK1137D_
Sequence Position645-649
Critical ResiduesP1; P2; P4; P5
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay; Mutational analysis
Interaction ID21832
Interacting DomainSH3 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)18280496
CommentsThe consensus R[ST][ST]SL motif in Bnr1p of Saccharomyces cerevisiae (strain CEN.PK113-7D) that is necessary, but not sufficient for binding to the Fus1p SH3 domain

Record No : 24

Instance ID11833
Regular ExpressionR[ST][ST]SL
Motif InstanceRTSSL
Bait Uniprot AccessionN1P866
Bait Uniprot IdentifierN1P866_YEASC
Bait Gene NameORF_Name:CENPK1137D_
Sequence Position117-121
Critical ResiduesP1; P2; P4; P5
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Peptide binding assay; Mutational analysis
Interaction ID21833
Interacting DomainSH3 domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)18280496
CommentsThe consensus R[ST][ST]SL motif in Ste5p of Saccharomyces cerevisiae (strain CEN.PK113-7D) that is necessary, but not sufficient for binding to the Fus1p SH3 domain

Record No : 25

Instance ID12018
Regular Expressionxxx[ST]x[ACVILF]$
Motif InstanceQRYSDF
Bait Uniprot AccessionQ9AJU4
Bait Uniprot IdentifierQ9AJU4_SHIFL
Bait Gene NameospE1
Sequence Position86-88
Critical ResiduesP4; P5; P6
Motif PTM(s)Unknown
Secondary StructureDisordered
Experimental Method(s)Mutation analysis; Pull down(GST tag)
Interaction ID22018
Interacting DomainPDZ domain
Disease Association(s)Shigellosis
Inhibitor(s)Unknown
Reference(s)25124035
CommentsC-terminal class 1 PDZ-binding motif in the effector protein OspE1 of Shigella flexneri serotype 2a strain 2457T that mediates its interaction with human PDZ and LIM domain protein 7 (PDLIM7/ENIGMA), leading to activation of isoforms of protein kinase C (PKC)

Record No : 26

Instance ID12019
Regular Expressionxxx[ST]x[ACVILF]$
Motif InstanceQRYSDF
Bait Uniprot AccessionQ9AJW6
Bait Uniprot IdentifierQ9AJW6_SHIFL
Bait Gene NameospE2
Sequence Position83-88
Critical ResiduesP4; P5; P6
Motif PTM(s)Unknown
Secondary StructureDisordered
Experimental Method(s)Sequence based prediction; Pull down(GST tag)
Interaction ID22019
Interacting DomainPDZ domain
Disease Association(s)Shigellosis
Inhibitor(s)Unknown
Reference(s)25124035
CommentsC-terminal class 1 PDZ-binding motif in the effector protein OspE2 of Shigella flexneri serotype 2a strain 2457T that mediates its interaction with human PDZ and LIM domain protein 7 (PDLIM7/ENIGMA)

Record No : 27

Instance ID12020
Regular Expressionxxx[ST]x[ACVILF]$
Motif InstanceQRYSDF
Bait Uniprot AccessionQ9AJU4
Bait Uniprot IdentifierQ9AJU4_SHIFL
Bait Gene NameospE1
Sequence Position86-88
Critical ResiduesP4; P5; P6
Motif PTM(s)Unknown
Secondary StructureDisordered
Experimental Method(s)Sequence based prediction; Fluorescence polarization
Interaction ID22020
Interacting DomainPDZ domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)25124035
CommentsC-terminal class 1 PDZ-binding motif in the effector protein OspE1 of Shigella flexneri serotype 2a strain 2457T that mediates its interaction with human PDZ and LIM domain protein 3 (PDLIM3)

Record No : 28

Instance ID12021
Regular Expressionxxx[ST]x[ACVILF]$
Motif InstanceQRYSDF
Bait Uniprot AccessionQ9AJU4
Bait Uniprot IdentifierQ9AJU4_SHIFL
Bait Gene NameospE1
Sequence Position86-88
Critical ResiduesP4; P5; P6
Motif PTM(s)Unknown
Secondary StructureDisordered
Experimental Method(s)Sequence based prediction; Fluorescence polarization
Interaction ID22021
Interacting DomainPDZ domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)25124035
CommentsC-terminal class 1 PDZ-binding motif in the effector protein OspE1 of Shigella flexneri serotype 2a strain 2457T that mediates its interaction with human MAGI1

Record No : 29

Instance ID12040
Regular ExpressionRGD
Motif InstanceRGD
Bait Uniprot AccessionQ77UU3
Bait Uniprot IdentifierQ77UU3_HHV8
Bait Gene NameORF8
Sequence Position27-29
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Sequence based prediction; Competition binding
Interaction ID22040
Interacting DomainN-terminal Integrin beta subunit
Disease Association(s)Kaposi's sarcoma
Inhibitor(s)Unknown
Reference(s)12584338, 24814923
CommentsHuman herpesvirus 8 (HHV-8) or Kaposi's sarcoma-associated herpesvirus envelope glycoprotein B binds beta 1 integrin via its RGD motif, which may play roles in the infection of target cells and in Kaposi's sarcoma pathogenesis

Record No : 30

Instance ID12054
Regular Expression[DE][DE][ILVM]Yx
Motif InstanceEDMYR
Bait Uniprot AccessionQ96BN8
Bait Uniprot IdentifierOTUL_HUMAN
Bait Gene NameOTULIN
Sequence Position53-57
Critical ResiduesP4
Motif PTM(s)Phosphorylation at Tyr-P4
Secondary StructureCoil
Experimental Method(s)X-ray crystallography; ITC; Mutation analysis; Co-IP; Pull down(GST tag)
Interaction ID22054
Interacting DomainPUB domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)24726327
CommentsThe PUB interacting motif (PIM) of human Ubiquitin thioesterase OTULIN that binds to the PUB domain of human E3 ubiquitin-protein ligase RNF31/HOIP



© 2014 Bose Institute, Kolkata. All rights reserved

For queries, suggestions and submission of novel motifs please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in)