MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB1219

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB1219

AttributeValue
SRA Study IDERP002060
Disease(s)Bronchiectasis → Bronchiectasis Exacerbation-Start of Treatment
Bronchiectasis → Bronchiectasis Exacerbation-End of Treatment
Bronchiectasis → Bronchiectasis Exacerbation-Post Treatment When Stable
Bronchiectasis → Bronchiectasis Stable
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
Instrument454 GS FLX Titanium
Library LayoutSINGLE
Year2013
Total Runs29
Processed Runs29
Variable RegionV1-V3
PMID23348972
CountryUnited Kingdom

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 29

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