MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB12565

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB12565

AttributeValue
SRA Study IDERP014054
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD Stable
Chronic Obstructive Pulmonary Disease (COPD) → COPD Exacerbation
Chronic Obstructive Pulmonary Disease (COPD) → COPD Follow Up
Chronic Obstructive Pulmonary Disease (COPD) → COPD Recovery
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
Instrument454 GS FLX Titanium
Library LayoutSINGLE
Year2016
Total Runs113
Processed Runs113
Variable RegionV3-V4
PMID35123490
CountryUnited Kingdom

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 113

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