MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB14967

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB14967

AttributeValue
SRA Study IDERP016649
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Isolation SourceSputum
Body siteLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIon Torrent PGM
Library LayoutSINGLE
Year2016
Processed Runs48
Variable RegionV3-V5
PMID28030619
CountryFrance

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis
N.B.- Discriminant analysis cannot be performed because there is only one subgroup in this BioProject

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 48

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