BioProject ID: PRJEB20665

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB20665

Attribute	Value
SRA Study ID	ERP022836
Disease(s)	Pneumonia → Ventilator Associated Pneumonia(VAP) Control → Non Ventilator Associated Pneumonia(VAP)
Isolation Source	Supraglottic Swab; Endotracheal Aspirate; BALF; Bronchial Brush
Biome	Lower Respiratory Tract; Upper Respiratory Tract
Assay Type	Amplicon-16S
Instrument	Illumina MiSeq
Library Layout	PAIRED
Year	2017
Total Runs	642
Processed Runs	553
Variable Region
PMID	25078907
Country	Switzerland

Analyses

Taxonomic profile	Supraglottic Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SBALF - Amplicon-16SBronchial Brush - Amplicon-16S
Discriminant analysis	Supraglottic Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SBALF - Amplicon-16SBronchial Brush - Amplicon-16S
Microbial co-occurence analysis	Supraglottic Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SBALF - Amplicon-16SBronchial Brush - Amplicon-16S

Download

Biom file	Download - Amplicon-16S

Summary of runs

Total number of runs found in the database for this BioProject ID = 553

Go to Page:    Go

First   Prev

Next   Last

Go to Page:    Go

First   Prev

Next   Last

---

© 2023 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in, ssaha4@gmail.com).