MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB26356

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB26356

AttributeValue
SRA Study IDERP108338
Disease(s)Asthma → Asthma
Isolation SourceSputum
Body siteLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2019
Processed Runs116
Variable RegionV1-V3
PMID30875247
CountryAustralia

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis
N.B.- Discriminant analysis cannot be performed because there is only one subgroup in this BioProject

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 116

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