MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB28158

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB28158

AttributeValue
SRA Study IDERP110331
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD
Isolation SourceSputum
Body siteLower Respiratory Tract
Assay TypeWMS
InstrumentIllumina NextSeq 550
Library LayoutSINGLE
Year2022
Processed Runs8
Variable Region
PMID
CountryGermany

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis
N.B.- Discriminant analysis cannot be performed because there is only one subgroup in this BioProject

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 8

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