MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB29062

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB29062

AttributeValue
SRA Study IDERP111330
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 1
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 2
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 4
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 3
Control → Non COPD
Isolation SourceBALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2019
Total Runs41
Processed Runs41
Variable RegionV3-V4
PMID29992131
CountrySwitzerland

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 41

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