MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB34389

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB34389

AttributeValue
SRA Study IDERP117281
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Control → Control
Isolation SourceSputum; BALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina NovaSeq 6000; Illumina MiSeq
Library LayoutPAIRED
Year2023; 2020
Total Runs245
Processed Runs236
Variable RegionV4
PMID35078737
CountryUnited Kingdom

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 236

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