MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB42999

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB42999

AttributeValue
SRA Study IDERP126917
Disease(s)COVID-19 → COVID-19 Symptomatic
COVID-19 → COVID-19 Asymptomatic
COVID-19 → COVID-19 Paucisymptomatic
COVID-19 → COVID-19 Severely Symptomatic
Control → Control
Isolation SourceNasopharyngeal Swab
BiomeUpper Respiratory Tract
Assay TypeWMS
InstrumentIon Torrent S5
Library LayoutSINGLE
Year2021
Total Runs48
Processed Runs47
Variable Region
PMID34248910
CountryItaly

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 47

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