MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB47870

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB47870

AttributeValue
SRA Study IDERP132183
Disease(s)COVID-19 → COVID-19 SARS-CoV-2 Positive
Control → COVID-19 SARS-CoV-2 Negative
Isolation SourceNasopharyngeal Swab; Throat Swab
BiomeUpper Respiratory Tract
Assay TypeWMS
InstrumentIllumina NovaSeq 6000
Library LayoutPAIRED
Year2021
Total Runs250
Processed Runs250
Variable Region
PMID
CountryCanada

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 250

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