MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB54014

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB54014

AttributeValue
SRA Study IDERP138840
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Isolation SourceSputum
Body siteLower Respiratory Tract
Assay TypeWMS
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2022
Processed Runs22
Variable Region
PMID37474497
CountryGermany

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurrence analysis
N.B.- Discriminant analysis cannot be performed because there is only one subgroup in this BioProject

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 22

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