MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB8917

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB8917

AttributeValue
SRA Study IDERP009960
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD Patient 7
Chronic Obstructive Pulmonary Disease (COPD) → COPD Patient 6
Chronic Obstructive Pulmonary Disease (COPD) → COPD Patient 5
Chronic Obstructive Pulmonary Disease (COPD) → COPD Patient 3
Chronic Obstructive Pulmonary Disease (COPD) → COPD Patient 1
Chronic Obstructive Pulmonary Disease (COPD) → COPD Patient 12
Chronic Obstructive Pulmonary Disease (COPD) → COPD Patient 10
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S; Amplicon-ITS
InstrumentIllumina HiSeq 2000
Library LayoutPAIRED
Year2015
Total Runs209
Processed Runs209
Variable RegionV4; ITS1
PMID26147303
CountryChina

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 209

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