MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA1017160

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1017160

AttributeValue
SRA Study IDSRP460498
Disease(s)Pneumonia → Community Acquired Pneumonia (CAP)
Pneumonia → Ventilator Associated Pneumonia(VAP)
Pneumonia → Hospital Acquired Pneumonia (HAP)
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeWMS
InstrumentIllumina NextSeq 550
Library LayoutSINGLE
Year2023
Total Runs59
Processed Runs59
Variable Region
PMID38188628
CountryChina

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 59

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