MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA1020542

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1020542

AttributeValue
SRA Study IDSRP463231
Disease(s)Pneumonia → Hospital Acquired Pneumonia (HAP)
Pneumonia → Hospital Acquired Pneumonia (HAP), ARDS
Control → Non Hospital Acquired Pneumonia (HAP), Non ARDS
Isolation SourceEndotracheal Aspirate
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2023
Total Runs275
Processed Runs275
Variable Region
PMID
CountryFrance

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 275

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