MDPD - Microbiome Database of Pulmonary Diseases

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BioProject ID: PRJNA1057348

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1057348

AttributeValue
SRA Study IDSRP480186
Disease(s)COVID-19 → COVID-19 4 Weeks After SARS-CoV-2 Infection
COVID-19 → COVID-19 8 Weeks After SARS-CoV-2 Infection
Isolation SourceNasal Lavage; Nasopharyngeal Swab; Sputum
BiomeLower Respiratory Tract; Upper Respiratory Tract; Nasal
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2024
Total Runs237
Processed Runs237
Variable RegionV3-V4
PMID38960315
CountryChina

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 237

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