MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA1081394

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1081394

AttributeValue
SRA Study IDSRP498898
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Isolation SourceSputum; Throat Sample; Sinus Sample
BiomeLower Respiratory Tract; Upper Respiratory Tract; Nasal
Assay TypeAmplicon-16S; WMS
InstrumentNextSeq 2000; Illumina NovaSeq 6000
Library LayoutPAIRED
Year2024
Total Runs549
Processed Runs549
Variable RegionV4
PMID38916354
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 549

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