BioProject ID: PRJNA242354

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA242354

Attribute	Value
SRA Study ID	SRP040549
Disease(s)	Tuberculosis → Tuberculosis Control → Control
Isolation Source	Sputum; Nasal Swab; OropharyngealSwab
Biome	Nasal; Upper Respiratory Tract; Lower Respiratory Tract
Assay Type	Amplicon-16S
Instrument	454 GS FLX
Library Layout	SINGLE
Year	2014
Total Runs	60
Processed Runs	60
Variable Region	V1-V2
PMID	25225609
Country	Colombia

Analyses

Taxonomic profile	Sputum - Amplicon-16SNasal Swab - Amplicon-16SOropharyngealSwab - Amplicon-16S
Discriminant analysis	Sputum - Amplicon-16SNasal Swab - Amplicon-16SOropharyngealSwab - Amplicon-16S
Multivariate association analysis	Sputum - Amplicon-16SNasal Swab - Amplicon-16SOropharyngealSwab - Amplicon-16S
Microbial co-occurence analysis	Sputum - Amplicon-16SNasal Swab - Amplicon-16SOropharyngealSwab - Amplicon-16S

Download

Biom file	Download - Amplicon-16S

Summary of runs

Total number of runs found in the database for this BioProject ID = 60

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