MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA256169

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA256169

AttributeValue
SRA Study IDSRP044880
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Cystic Fibrosis → Cystic Fibrosis Pre Antibacterial Therapy
Cystic Fibrosis → Cystic Fibrosis Post Antibacterial Therapy
Cystic Fibrosis → Cystic Fibrosis Inter Antibacterial Therapy
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina HiSeq 1000
Library LayoutPAIRED
Year2015
Total Runs28
Processed Runs28
Variable Region
PMID
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 28

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