MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA299077

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA299077

AttributeValue
SRA Study IDSRP065072
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD Stable
Chronic Obstructive Pulmonary Disease (COPD) → COPD Exacerbation
Chronic Obstructive Pulmonary Disease (COPD) → COPD Post Therapy
Chronic Obstructive Pulmonary Disease (COPD) → COPD Recovery
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
Instrument454 GS FLX
Library LayoutSINGLE
Year2015
Total Runs476
Processed Runs476
Variable RegionV3-V5
PMID26917613
CountryUnited Kingdom

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 476

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