MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA386984

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA386984

AttributeValue
SRA Study IDSRP107187
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 1
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 2
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 3
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
Instrument454 GS FLX Titanium
Library LayoutSINGLE
Year2017
Total Runs27
Processed Runs27
Variable RegionV6-V8
PMID29579057
CountryCanada

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 27

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