BioProject ID: PRJNA413615

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA413615

Attribute	Value
SRA Study ID	SRP119571
Disease(s)	Pneumonia → Pneumonia Healthy → Healthy
Isolation Source	BALF; Nasopharyngeal Swab; OropharyngealSwab
Biome	Lower Respiratory Tract; Upper Respiratory Tract
Assay Type	Amplicon-16S; WMS
Instrument	Illumina MiniSeq; Illumina HiSeq 4000
Library Layout	PAIRED
Year	2018
Total Runs	352
Processed Runs	352
Variable Region	V3-V4; NA
PMID	31367746
Country	China

Analyses

Taxonomic profile	BALF - Amplicon-16SBALF - WMSNasopharyngeal Swab - Amplicon-16SNasopharyngeal Swab - WMSOropharyngealSwab - Amplicon-16SOropharyngealSwab - WMS
Discriminant analysis	BALF - Amplicon-16SBALF - WMSNasopharyngeal Swab - Amplicon-16SNasopharyngeal Swab - WMSOropharyngealSwab - Amplicon-16SOropharyngealSwab - WMS
Multivariate association analysis	BALF - Amplicon-16SBALF - WMSNasopharyngeal Swab - Amplicon-16SNasopharyngeal Swab - WMSOropharyngealSwab - Amplicon-16SOropharyngealSwab - WMS
Microbial co-occurence analysis	BALF - Amplicon-16SBALF - WMSNasopharyngeal Swab - Amplicon-16SNasopharyngeal Swab - WMSOropharyngealSwab - Amplicon-16SOropharyngealSwab - WMS

Download

Biom file	Download - Amplicon-16SDownload - WMS

Summary of runs

Total number of runs found in the database for this BioProject ID = 352

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