MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA450137

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA450137

AttributeValue
SRA Study IDSRP139967
Disease(s)Other Pulmonary Infections → Lower Respiratory Tract Infections (LRTI)
Control → Non Lower Respiratory Tract Infections (LRTI)
Other Pulmonary Infections → Unknown Lower Respiratory Tract Infections (LRTI)
Isolation SourceEndotracheal Aspirate
BiomeLower Respiratory Tract
Assay TypeWMS
InstrumentIllumina HiSeq 4000
Library LayoutPAIRED
Year2018
Total Runs184
Processed Runs92
Variable Region
PMID30482864
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 92

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