MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA491749

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA491749

AttributeValue
SRA Study IDSRP162074
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD Survivor
Chronic Obstructive Pulmonary Disease (COPD) → COPD Non Survivor
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2018
Total Runs112
Processed Runs112
Variable RegionV4
PMID30376356
CountryCanada

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 112

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