MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA512576

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA512576

AttributeValue
SRA Study IDSRP175099
Disease(s)Sarcoidosis → Sarcoidosis
Interstitial Lung Disease (ILD) → ILD
Idiopathic Pulmonary Fibrosis (IPF) → IPF
Chronic Obstructive Pulmonary Disease (COPD) → COPD Stable
Chronic Obstructive Pulmonary Disease (COPD) → COPD Exacerbation
Isolation SourceBALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2020
Total Runs43
Processed Runs43
Variable RegionV3-V4
PMID33597669
CountryIndia

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 43

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