MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA516442

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA516442

AttributeValue
SRA Study IDSRP188475
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S; WMS
InstrumentIllumina HiSeq 2000
Library LayoutPAIRED
Year2019
Total Runs93
Processed Runs81
Variable RegionV4
PMID32631930
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 81

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