MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA522449

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA522449

AttributeValue
SRA Study IDSRP185921
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD
Control → Control
Isolation SourceSputum; BALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-ITS
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2020
Total Runs202
Processed Runs28
Variable Region
PMID
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 28

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