MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA539959

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA539959

AttributeValue
SRA Study IDSRP193985
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD
COPD-Bronchiectasis Association (CBA) → COPD-Bronchiectasis Association (CBA)
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2021
Total Runs186
Processed Runs186
Variable Region
PMID
CountryUnited Kingdom

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 186

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