MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA541815

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA541815

AttributeValue
SRA Study IDSRP196524
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD Day 1 Sample
Chronic Obstructive Pulmonary Disease (COPD) → COPD Day 7 Sample
Chronic Obstructive Pulmonary Disease (COPD) → COPD Day 14 Sample
Isolation SourceEndotracheal Aspirate
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutSINGLE
Year2020
Total Runs56
Processed Runs51
Variable RegionV3-V4
PMID32632240
CountryTaiwan

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 51

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