MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA591432

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA591432

AttributeValue
SRA Study IDSRP232934
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Cystic Fibrosis → Cystic Fibrosis Baseline
Cystic Fibrosis → Cystic Fibrosis Exacerbation
Cystic Fibrosis → Cystic Fibrosis Additional Symptoms of Airway Complications
Isolation SourceOropharyngealSwab; Nasopharyngeal Smear; Polyp; Sputum; Tracheal Aspirate
BiomeUpper Respiratory Tract; Lower Respiratory Tract; Nasal
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2019
Total Runs101
Processed Runs101
Variable Region
PMID
CountryRussia

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 101

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