MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA609242

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA609242

AttributeValue
SRA Study IDSRP266460
Disease(s)Idiopathic Pulmonary Fibrosis (IPF) → IPF
Pneumonitis → Chronic Hypersensitivity Pneumonitis (CHP)
Control → Control
Isolation SourceBALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2020
Total Runs198
Processed Runs183
Variable RegionV4
PMID32692582
CountryUnited Kingdom

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 183

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