BioProject ID: PRJNA629006

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA629006

Attribute	Value
SRA Study ID	SRP259143
Disease(s)	Cystic Fibrosis → Cystic Fibrosis
Isolation Source	Sputum; Oral Sample; Nasal Sample; Gastric Strings; Duodenal Strings; Esophageal Sample
Biome	Lower Respiratory Tract; Oral; Nasal; Stomach
Assay Type	Amplicon-16S
Instrument	Illumina MiSeq
Library Layout	PAIRED
Year	2021
Total Runs	176
Processed Runs	174
Variable Region	V1-V2
PMID	33394582
Country	USA

Analyses

Taxonomic profile	Sputum - Amplicon-16SOral Sample - Amplicon-16SNasal Sample - Amplicon-16SGastric Strings - Amplicon-16SDuodenal Strings - Amplicon-16SEsophageal Sample - Amplicon-16S
Discriminant analysis	Sputum - Amplicon-16SOral Sample - Amplicon-16SNasal Sample - Amplicon-16SGastric Strings - Amplicon-16SDuodenal Strings - Amplicon-16SEsophageal Sample - Amplicon-16S
Microbial co-occurence analysis	Sputum - Amplicon-16SOral Sample - Amplicon-16SNasal Sample - Amplicon-16SGastric Strings - Amplicon-16SDuodenal Strings - Amplicon-16SEsophageal Sample - Amplicon-16S

Download

Biom file	Download - Amplicon-16S

Summary of runs

Total number of runs found in the database for this BioProject ID = 174

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