MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA662556

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA662556

AttributeValue
SRA Study IDSRP282311
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Isolation SourceBALF
Body siteLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2020
Processed Runs74
Variable RegionV3-V4
PMID33172004
CountryAustralia

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis
N.B.- Discriminant analysis cannot be performed because there is only one subgroup in this BioProject

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 74

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