MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA666192

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA666192

AttributeValue
SRA Study IDSRP285673
Disease(s)Cystic Fibrosis → Cystic Fibrosis
Isolation SourceSputum
Body siteLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutSINGLE
Year2020
Processed Runs77
Variable RegionV4
PMID33330902
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis
N.B.- Discriminant analysis cannot be performed because there is only one subgroup in this BioProject

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 77

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