MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA673585

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA673585

AttributeValue
SRA Study IDSRP311017
Disease(s)COVID-19 → COVID-19 Mild
COVID-19 → COVID-19 Severe with Admission to ICU
COVID-19 → COVID-19 Severe with Hospitalization
Control → COVID-19 SARS-CoV-2 Negative
Isolation SourceNasopharyngeal Swab
BiomeUpper Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2021
Total Runs74
Processed Runs74
Variable RegionV3-V4
PMID33815323
CountrySpain

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 74

Go to Page:         

    
Go to Page:         

    


© 2023 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in, ssaha4@gmail.com).