MDPD - Microbiome Database of Pulmonary Diseases
Attribute | Value |
---|---|
SRA Study ID | SRP311017 |
Disease(s) | COVID-19 → COVID-19 Mild COVID-19 → COVID-19 Severe with Admission to ICU COVID-19 → COVID-19 Severe with Hospitalization Control → COVID-19 SARS-CoV-2 Negative |
Isolation Source | Nasopharyngeal Swab |
Biome | Upper Respiratory Tract |
Assay Type | Amplicon-16S |
Instrument | Illumina MiSeq |
Library Layout | PAIRED |
Year | 2021 |
Total Runs | 74 |
Processed Runs | 74 |
Variable Region | V3-V4 |
PMID | 33815323 ![]() |
Country | Spain |
Taxonomic profile | |
---|---|
Discriminant analysis | |
Multivariate association analysis | |
Microbial co-occurence analysis |
Biom file |
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Total number of runs found in the database for this BioProject ID = 74
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