MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA675110

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA675110

AttributeValue
SRA Study IDSRP291616
Disease(s)COVID-19 → COVID-19
COVID-19 → COVID-19 Recovery
Control → Control
Isolation SourceNasopharyngeal Swab
BiomeUpper Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2020
Total Runs38
Processed Runs38
Variable RegionV1-V3
PMID33659220
CountryItaly

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 38

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