BioProject ID: PRJNA683617

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA683617

Attribute	Value
SRA Study ID	SRP297099
Disease(s)	COVID-19 → COVID-19 Control → Non COVID-19 Healthy → Healthy
Isolation Source	Oropharyngeal Swab; Endotracheal Aspirate; Nasopharyngeal Swab
Body site	Lower Respiratory Tract; Upper Respiratory Tract
Assay Type	Amplicon-16S
Instrument	Illumina HiSeq 2500
Library Layout	PAIRED
Year	2020
Processed Runs	571
Variable Region	V1-V2
PMID	34399607
Country	USA

Analyses

Taxonomic profile	Oropharyngeal Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SNasopharyngeal Swab - Amplicon-16S
Discriminant analysis	Oropharyngeal Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SNasopharyngeal Swab - Amplicon-16S
Microbial co-occurrence analysis	Oropharyngeal Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SNasopharyngeal Swab - Amplicon-16S

Download

Biom file	Download - Amplicon-16S

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 571

Go to Page:    Go

First   Prev

Next   Last

Go to Page:    Go

First   Prev

Next   Last

---

© 2025 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in, ssaha4@gmail.com).