MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA684070

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA684070

AttributeValue
SRA Study IDSRP298640
Disease(s)COVID-19 → COVID-19 Moderate
COVID-19 → COVID-19 Critical
COVID-19 → COVID-19 Severe
COVID-19 → COVID-19 Mild
Healthy → Healthy
Isolation SourceStool; Throat Swab
Body siteGut; Upper Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina NovaSeq 6000
Library LayoutPAIRED
Year2020
Processed Runs297
Variable RegionV3-V4
PMID34294722
CountryChina

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurrence analysis

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 297

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