MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA687143

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA687143

AttributeValue
SRA Study IDSRP298878
Disease(s)COVID-19 → COVID-19 SARS-CoV-2 Positive
Control → COVID-19 SARS-CoV-2 Negative
Isolation SourceBALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2021
Total Runs52
Processed Runs48
Variable RegionV3-V4
PMID33980943
CountryItaly

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 48

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