MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA703574

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA703574

AttributeValue
SRA Study IDSRP307360
Disease(s)COVID-19 → COVID-19 SARS-CoV-2 Positive
COVID-19 → COVID-19 Indeterminate
Control → COVID-19 SARS-CoV-2 Negative
Isolation SourceNasopharyngeal Swab
BiomeUpper Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2022
Total Runs344
Processed Runs331
Variable RegionV4
PMID35247047
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 331

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