MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA726058

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA726058

AttributeValue
SRA Study IDSRP316859
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 1
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 2
Chronic Obstructive Pulmonary Disease (COPD) → COPD GOLD 3
Control → Non COPD
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2023
Total Runs200
Processed Runs200
Variable RegionV3-V4
PMID36790203
CountryUganda

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 200

Go to Page:         

    
Go to Page:         

    


© 2023 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in, ssaha4@gmail.com).