MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA727667

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA727667

AttributeValue
SRA Study IDSRP319096
Disease(s)Lung Cancer → Inflammation Nodule Lung Tissue
Lung Cancer → Lung Tumor Tissue
Lung Cancer → Tumor Side BALF
Control → No Tumor Side BALF
Control → Nodules Adjacent Tissue
Lung Cancer → Tumor Adjacent Tissue
Lung Cancer → Lung Cancer
Isolation SourceTumor Tissue; BALF; Lung Tissue; Stool
BiomeLung; Lower Respiratory Tract; Gut
Assay TypeAmplicon-16S; WMS
InstrumentIllumina NovaSeq 6000; Illumina MiSeq
Library LayoutPAIRED
Year2024
Total Runs206
Processed Runs206
Variable Region
PMID37738973
CountryChina

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 206

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