MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA742164

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA742164

AttributeValue
SRA Study IDSRP326134
Disease(s)COVID-19 → COVID-19 SARS-CoV-2 Positive
Control → COVID-19 SARS-CoV-2 Negative
Isolation SourceBALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-ITS
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2021
Total Runs49
Processed Runs49
Variable RegionITS2
PMID35150910
CountryItaly

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 49

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