MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA742244

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA742244

AttributeValue
SRA Study IDSRP326288
Disease(s)Lung Cancer → Lung Cancer
Control → Non Cancer
Lung Cancer → Adenocarcinoma
Lung Cancer → Small Cell Carcinoma
Interstitial Lung Disease (ILD) → ILD
Chronic Obstructive Pulmonary Disease (COPD) → COPD
Lung Cancer → Small Cell Lung Cancer (SCLC)
Lung Cancer → Non Small Cell Lung Cancer (NSCLC)
Lung Cancer → Large Cell Carcinoma
Isolation SourceBALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2021
Total Runs137
Processed Runs95
Variable RegionV4
PMID34294826
CountryPortugal

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 95

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