MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA780512

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA780512

AttributeValue
SRA Study IDSRP346149
Disease(s)Pneumonia → Ventilator Associated Pneumonia(VAP)
Control → Non Ventilator Associated Pneumonia(VAP)
Isolation SourceBALF
BiomeLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2021
Total Runs93
Processed Runs91
Variable RegionV4-V5
PMID35794610
CountryNetherlands

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurence analysis

Download

Biom file

Summary of runs

Total number of runs found in the database for this BioProject ID = 91

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